Windy Knoll GC Springfield, OH used to have a bye hole (however, I do not see it on the aerial anymore?)
Forest Dunes GC Forest Dunes course has a bye hole (117 yards) with a bunker in the middle of the green
Legendary Run GC Cincinnati, OH has a bye hole 163-yard par 3
Raymond Memorial GC Columbus, OH has 22 holes, every par 3 has two holes
Streamsong Resort Blue / Red have an extra par 150-yard par 3
Black bear GC Vanderbilt, MI has a 159-yard extra par 3 to start the round
Old Channel Trail GC Montague MI has a 27 holes of golf and a 3-hole practice course and another 3-hole practice course (that originally was 3 original Robert Bruce Harris holes) that is now abandoned.
Blackthorn GC in South Bend, IN used to start the round with the 266 yard Blarney hole, but I believe it was converted into housing
Old Hickory GC Woodbridge, VA has a bye hole / 19th hole that also doubles as the practice green
Watchung Valley GC Watchung, NJ had an extra 11th hole par 3