I think Ross put most of his debris piles mounds on the side of fairways. It is always riskly to put something that will settle that close to greens.
I think it was merely a design choice. Ross was certainly aware that many scottish courses set in dunes, and it was probably not unheard of him to try to replicate those as a design feature, although any earthmoving with horse and scoop certainly would have trouble replicating the scale!
As mentioned, he may have wanted to protect a tee, divert water, or just to give a green a different look.
It may have been a technical problem. They tried to balance cut and fill on site in many cases. If they "eyeballed" a green grade (since they had no true grading plans) and set it a bit low, they had to get rid of the dirt somewhere close, and a greenside mound is a logical addition. If it was a fill pad, maybe they left the site for a while, and the horse kept working, and brought in too much fill causing the same problem.