Tom - My guess is 60/40 in favor of the long course because of the green speeds, the color and the ability to move up and play from an appropriate distance. It is interesting that most of the recent highly touted courses would fit more closely to the shorter course profile than the longer ones.
In addition, there are plenty of "wild" greens that I do not enjoy. Many RT Jones Jr. courses I have played have wild undulations but I find them largely goofy rather than interesting. There is another local club, Rolling Green, that I really disliked after one round. The greens were a random collection of mounds that were very difficult to putt and, at least with limited exposure, seemed to just make the game more difficult rather than more interesting.
I suspect the greens I dislike are poorly done, but for the life of me, I cannot tell you why I would consider them poor and the greens at Pasatiempo or other older couses interesting.